Patricia BONIN

2019

• Pressure-Retaining Sampler and High-Pressure Systems to Study Deep-Sea Microbes Under in situ Conditions

  Authors : Garel Marc, Bonin Patricia, Martini Severine, Guasco Sophie, Roumagnac Marie, Bhairy Nagib, Armougom Fabrice, Tamburini Christian,
  Read the publication

2018

• The nature of electron acceptor (MnIV/NO3) triggers differential expression of genes associated with stress and ammonium limitation responses in Shewanella algae C6G3

  Authors : Aigle Axel, Bonin Patricia, -Nunez Nicolas Fernandez, Loriod Béatrice, Guasco Sophie, Bergon Aurélie, Armougom Fabrice, Iobbi-Nivol Chantal, Imbert Jean, Michotey Valerie,
  Read the publication

• Salinity shifts in marine sediment: Importance of number of fluctuation rather than their intensities on bacterial denitrifying community

  Authors : Zaghmouri Imen, Michotey Valérie, Armougom Fabrice, Guasco Sophie, Bonin Patricia,
  Read the publication

• Evolutionary Success of Prokaryotes

  Authors : Bertrand Jean-Claude, Bonin Patricia, Ollivier Bernard, Alain Karine, Godfroy Anne, Pradel Nathalie, Normand Philippe,
  Read the publication

2017

• Monitoring photo-oxidative and salinity-induced bacterial stress in the Canadian Arctic using specific lipid tracers

  Authors : Amiraux Remi, Belt Simon, Vaultier Frederic, Galindo Virginie, Gosselin Michel, Bonin Patricia, Rontani Jean-Francois,
  Read the publication

• Monitoring photo-oxidative and salinity-induced bacterial stress in the Canadian Arctic using specific lipid tracers

  Authors : Amiraux Remi, Belt Simon, Vaultier Frederic, Galindo Virginie, Gosselin Michel, Bonin Patricia, Rontani Jean-Francois,
  Read the publication

• Physiological and transcriptional approaches reveal connection between nitrogen and manganese cycles in Shewanella algae C6G3

  Authors : Aigle Axel, Bonin Patricia, Iobbi-Nivol Chantal, Méjean Vincent, Michotey Valérie,
  Read the publication

2016

• Denitrification activity in mangrove sediments varies with associated vegetation

  Authors : Fernandes Sheryl Oliveira, Dutta Pinky, Gonsalves Maria-Judith, Bonin Patricia C., Lokabharathi P. A.,
  Read the publication

• Bacteria as part of bioluminescence emission at the deep ANTARES station (North-Western Mediterranean Sea) during a one-year survey

  Authors : Martini Severine, Michotey Valerie, Casalot Laurie, Bonin Patricia, Guasco Sophie, Garel Marc, Tamburini Christian,
  Read the publication

• Metatranscriptomes of oil-contaminated marine coastal sediment affected by oil addition and/or by the bioturbating activity of the marine polychaete Hediste diversicolor: Who are the microbial players?

  Authors : Militon Cécile, Atkinson Alexandre, Michotey Valerie, Jeziorski Celine, Cravo-Laureau Cristiana, Duran Robert, Bonin Patricia, Cuny Philippe,
  Read the publication

• The impact of long-term hydrocarbon exposure on the structure, activity, and biogeochemical functioning of microbial mats

  Authors : Aubé Johanne, Senin Pavel, Pringault Olivier, Bonin Patricia, Deflandre Bruno, Bouchez Olivier, Bru Noëlle, Biritxinaga-Etchart Edurne, Klopp Christophe, Guyoneaud Rémy, Goñi-Urriza Marisol,
  Read the publication

• Coupling of bacterial nitrification with denitrification and anammox supports N removal in intertidal sediments (Arcachon Bay, France)

  Authors : Fernandes Sheryl, Javanaud Cedric, Michotey Valerie, Guasco Sophie, Anschutz Pierre, Bonin Patricia,
  Read the publication

2015

• Microbial ecology of hydrocarbon-polluted coastal sediments.

  Authors : Duran Robert, Cuny Philippe, Bonin Patricia, Cravo-Laureau Cristiana,
  Read the publication

• Molecular and biochemical characterization of mannitol-1-phosphate dehydrogenase from the model brown alga Ectocarpus sp.

  Authors : Bonin Patricia, Groisillier Agnès, Raimbault Alice, Guibert Anaïs, Boyen Catherine, Tonon Thierry,
  Read the publication

• Dynamic of bacterial communities attached to lightened phytodetritus

  Authors : Petit Morgan, Bonin Patricia, Amiraux Remi, Michotey Valerie, Guasco Sophie, Armitano Joshua, Jourlin-Castelli Cécile, Vaultier Frederic, Méjean Vincent, Rontani Jean-Francois,
  Read the publication

• Environmental microbiology reveals the Earth secret life.

  Authors : Faure Denis, Bonin Patricia, Duran Robert,
  Read the publication

• Draft-genome sequence of Shewanella algae strain C6G3

  Authors : Aigle Axel, Michotey Valerie, Bonin Patricia,
  Read the publication

• Ecological significance of Synergistetes in the biological treatment of tuna cooking wastewater by an anaerobic sequencing batch reactor.

  Authors : Militon Cécile, Hamdi Olfa, Michotey Valerie, Fardeau Marie-Laure, Ollivier Bernard, Bouallagui Hassib, Hamdi Moktar, Bonin Patricia,
  Read the publication

• Use of dispersant in mudflat oil-contaminated sediment: behavior and effects of dispersed oil on micro- and macrobenthos.

  Authors : Cuny Philippe, Gilbert Franck, Militon Cécile, Stora Georges, Bonin Patricia, Michotey Valerie, Guasco Sophie, Duboscq Karine, Cagnon Christine, Jézéquel Ronan, Cravo-Laureau Cristiana, Duran Robert,
  Read the publication

• Environmental microbiology as a mosaic of explored ecosystems and issues

  Authors : Faure Denis, Bonin Patricia, Duran Robert, Amato Pierre, Arsene-Ploetze Florence, Auguet J.C., Legrand Bernard, Bertin P.N., Bettarel Y., Bigot-Clivot A, Blot N, Blouin Manuel, Bormans Myriam, Bouvy M, Bruneel O, Cébron A, Christaki U, Couée Ivan, Cravo-Laureau Cristiana, Danger M, de Lorgeril J, Desdevises Y, Dessaux Y, Destoumieux-Garzón D, Duprat E, Erauso Gaël, Haichar Fel Z, Fouilland E, Francez Andre-Jean, Fromin N, Geffard Alain, Ghiglione Jf, Grossi Vincent, Guizien K, Hubas C, Huguet A, Jardillier L, Jouquet P, Joux F, Kaisermann A, Kaltz O, Lata Jc, Lecerf A, Leyval C, Luis P, Masseret E, Niboyet A, Normand P, Plewniak F, Poly F, Prado S, Quaiser Achim, Ratet P, Richaume A, Rolland Jl, Rols Jl, Rontani Jf, Rossi F, Sablé Sophie, Sivadon P, Soudant P, Tamburini C, Tribollet Aline, Valiente Moro C, van Wambeke France, Vandenkoornhuyse Philippe, Vuilleumier Stéphane, Vandenkoornhuyse Philippe,
  Read the publication

• Effect of physical sediments reworking on hydrocarbon degradation and bacterial community structure in marine coastal sediments.

  Authors : Duran Robert, Bonin Patricia, Jezequel Ronan, Dubosc Karine, Gassie Claire, Terrisse Fanny, Abella Justine, Cagnon Christine, Militon Cécile, Michotey Valerie, Gilbert Franck, Cuny Philippe, Cravo-Laureau Cristiana,
  Read the publication

• Anaerobic nitrification-denitrification mediated by Mn-oxides in meso-tidal sediments: Implications for N-2 and N2O production

  Authors : Fernandes Sheryl, Javanaud Cedric, Aigle Axel, Michotey Valerie, Guasco Sophie, Deborde Jonathan, Deflandre Bruno, Anschutz Pierre, Bonin Patricia,
  Read the publication

• Aminobacterium thunnarium sp. nov., a mesophilic, amino acid-degrading bacterium isolated from an anaerobic sludge digester, pertaining to the phylum Synergistetes.

  Authors : Hamdi Olfa, Ben Hania Wajdi, Postec Anne, Bouallagui Hassib, Hamdi Moktar, Bonin Patricia, Ollivier Bernard, Fardeau Marie-Laure,
  Read the publication

• Substrates specialization in lipid compounds and hydrocarbons of Marinobacter genus.

  Authors : Bonin Patricia, Vieira Christophe, Grimaud Régis, Militon Cécile, Cuny Philippe, Lima Oscar, Guasco Sophie, Brussaard Corina P D, Michotey Valerie,
  Read the publication

• Biogeochemical Cycles

  Authors : Bertrand Jean-Claude, Bonin Patricia, Caumette Pierre, Gattuso Jean-Pierre, Grégori Gérald, Guyoneaud Rémy, Le Roux Xavier, Matheron Robert, Poly Franck,
  Read the publication

• Complete genome sequence of a new member of the Marseilleviridae recovered from the Brackish submarine spring in the Cassis Port-Miou Calanque, France

  Authors : Doutre Gabriel, Arfib Bruno, Rochette Pierre, Claverie Jean-Michel, Bonin Patricia, Abergel Chantal,
  Read the publication

2014

• Etude du métabolisme du mannitol chez l'algue brune modèle Ectocarpus siliculosus : caractérisation de l'enzyme clé mannitol-1-phosphate déshydrogénase.

  Authors : Bonin Patricia,
  Read the publication

• Mannitol metabolism in brown algae involves a new phosphatase family.

  Authors : Groisillier Agnès, Shao Zhanru, Michel Gurvan, Goulitquer Sophie, Bonin Patricia, Krahulec Stefan, Nidetzky Bernd, Duan Delin, Boyen Catherine, Tonon Thierry,
  Read the publication

• Bacterial diversity in relatively pristine and anthropogenically-influenced mangrove ecosystems (Goa, India).

  Authors : Fernandes Sheryl, Kirchman David L, Michotey Valerie, Bonin Patricia, Lokabharathi P A,
  Read the publication

2013

• Denitrification activity is closely linked to the total ambient Fe concentration in mangrove sediments of Goa, India

  Authors : Fernandes S, Gonsalves M, Michotey Valerie, Bonin Patricia, Lokabharathi P,
  Read the publication

• Trends in salinity and inorganic nitrogen compounds in the Berre lagoon (1994-2011) bacterial activities and nitrogen budgets

  Authors : Zaghmouri Imen, Michotey Valerie, Guasco Sophie, Raimbault Patrick, Garcia Nicole, Bernard Guillaume, Bonin Patricia,
  Read the publication

• Anaerobic bacterial degradation of pristenes and phytenes in marine sediments does not lead to pristane and phytane during early diagenesis

  Authors : Rontani Jean-Francois, Bonin Patricia, Guasco Sophie, Vaultier Frederic, Volkman John K.,
  Read the publication

2012

• Spatio-temporal diversity of free-living and particle-attached prokaryotes in the tropical lagoon of Ahe atoll (Tuamotu Archipelago) and its surrounding oceanic waters

  Authors : Michotey Valerie, Guasco Sophie, Boeuf Dominique, Morezzi Nicola, Durieu Brice, Charpy Loïc, Bonin Patricia,
  Read the publication

• Systems biology approaches at cellular level in the model organism Ectocarpus siliculosus to better understand brown algal physiology

  Authors : Tonon Thierry, Bonin Patricia, Prigent Sylvain, Shao Z., Groisillier Agnès, Rousvoal Sylvie, Goulitquer Sophie, Bourdon Jérémie, Eveillard Damien, Boyen Catherine, Siegel Anne,
  Read the publication

• Mimicking floodplain reconnection and disconnection using 15N mesocosm incubations

  Authors : Welti N, Bondar-Kunze E, Mair M, Bonin Patricia, Wanek W, Pinay G, Hein T,
  Read the publication

• Desulfosoma profundi sp nov., a thermophilic sulfate-reducing bacterium isolated from a deep terrestrial geothermal spring in France

  Authors : Gregoire Patrick, Fardeau Marie Laure, Guasco Sophie, Lagiere Joel, Cambar Jean, Michotey Valerie, Bonin Patricia, Ollivier Bernard,
  Read the publication

• Nitrogen-limited mangrove ecosystems conserve N through dissimilatory nitrate reduction to ammonium

  Authors : Fernandes Sheryl, Bonin Patricia, Michotey Valerie, Garcia Nicole, Lokabharathi P. A.,
  Read the publication

• Mimicking floodplain reconnection and disconnection using ¹⁵N mesocosm incubations

  Authors : Welti N., Bondar-Kunze E., Mair M., Bonin Patricia, Wanek W., Pinay Gilles, Hein T.,
  Read the publication

• Genome sequence of the marine bacterium Marinobacter hydrocarbonoclasticus SP17, which forms biofilms on hydrophobic organic compounds

  Authors : Grimaud R., Ghiglione J.-F., Cagnon Christine, Lauga B., Vaysse P.-J., Rodriguez-Blanco A., Mangenot S., Cruveiller S., Barbe V., Duran R., Wu L.-F., Talla E., Bonin Patricia, Michotey V.,
  Read the publication

• Denitrification prevails over anammox in tropical mangrove sediments (Goa, India)

  Authors : Fernandes Sheryl, Michotey Valerie, Guasco Sophie, Bonin Patricia, Bharathi P. A. Loka,
  Read the publication

2011

• Isolation and characterization of Thermanaerothrix daxensis gen. nov., sp. nov., a thermophilic anaerobic bacterium pertaining to the phylum "Chloroflexi", isolated from a deep hot aquifer in the Aquitaine Basin.

  Authors : Gregoire Patrick, Fardeau Marie Laure, Joseph Manon, Guasco Sophie, Hamaide F, Biasutti S, Michotey Valerie, Bonin Patricia, Ollivier Bernard,
  Read the publication

• Quantification des activités du cycle de l'azote dans des sédiments soumis à des apports d'eau douce: impact sur l'état d'eutrophisation de l'écosystème

  Authors : Zaghmouri Imen, Bonin Patricia, Michotey Valerie,
  Read the publication

• Isolation and characterization of Thermanaerothrix daxensis gen. nov., sp nov., a thermophilic anaerobic bacterium pertaining to the phylum "Chloroflexi", isolated from a deep hot aquifer in the Aquitaine Basin

  Authors : Gregoire Patrick, Fardeau Marie Laure, Joseph Manon, Guasco Sophie, Hamaide Francette, Biasutti Sandra, Michotey Valerie, Bonin Patricia, Ollivier Bernard,
  Read the publication

• Anaerobic ammonium oxidation mediated by Mn-oxides: from sediment to strain level

  Authors : Javanaud Cedric, Michotey Valerie, Guasco Sophie, Garcia Nicole, Anschutz Pierre, Canton Mathieu, Bonin Patricia,
  Read the publication

• Caldilinea tarbellica sp nov., a filamentous, thermophilic, anaerobic bacterium isolated from a deep hot aquifer in the Aquitaine Basin

  Authors : Gregoire Patrick, Bohli Malek, Cayol Jean Luc, Joseph Manon, Guasco Sophie, Dubourg Karine, Cambar Jean, Michotey Valerie, Bonin Patricia, Fardeau Marie Laure, Ollivier Bernard,
  Read the publication

2010

• Denitrification : An important Pathway for Nitrous Oxide Production in Tropical Mangrove Sediments (Goa, India)

  Authors : Oliveira Fernandes Sheryl, Loka Bharathi P.A., Bonin Patricia, Michotey Valérie,
  Read the publication

• Potential alteration of UK37 paleothermometer due to selective degradation of alkenones by marine bacteria isolated from the haptophyte Emiliania huxleyi

  Authors : Zabeti Nathalie, Bonin Patricia, Volkmann John Kingston, Jameson Ian D., Guasco Sophie, Rontani Jean François,
  Read the publication

• Fatty acid composition of bacterial strains associated with living cells of the haptophyte Emiliania huxleyi

  Authors : Zabeti Nathalie, Bonin Patricia, Volkman John K., Guasco Sophie, Rontani Jean François,
  Read the publication

• Caldinitratiruptor microaerophilus, gen.nov., sp. nov. isolated from a French hot spring (Chaudes-Aigues, Massif Central) : a novel cultivated facultative microaerophilic anaerobic thermophile pertaining to the Symbiobacterium branch within the Firmicutes

  Authors : Fardeau Marie-Laure, Barsotti Vanessa, Cayol Jean Luc, Guasco Sophie, Michotey Valérie, Joseph Manon, Bonin Patricia, Ollivier Bernard,
  Read the publication

2009

• Formation of pristane from a-tocopherol under simulated anoxic sedimentary conditions : A combination of biotic and abiotic degradative processes

  Authors : Rontani Jean François, Nassiry Mina, Michotey Valérie, Guasco Sophie, Bonin Patricia,
  Read the publication

• Seasonal variation in di-nitrogen fluxes and associated processes (denitrification, anammox and nitrogen fixation) in sediment subject to shellfish farming influences

  Authors : Minjeaud Laura, Michotey Valérie, Garcia Nicole, Bonin Patricia,
  Read the publication

2008

• Nitrogen fluxes from marine sediments : quantification of the associated co-occurring bacterial processes

  Authors : Minjeaud Laura, Bonin Patricia, Michotey Valérie,
  Read the publication

• Aerobic metabolism of vitamin E by marine bacteria : interaction with free radical oxidation (autoxidation) processes

  Authors : Rontani Jean François, Nassiry Mina, Guasco Sophie, Mouzdahir Abdelkrim, Bonin Patricia,
  Read the publication

• Degradation of alkenones by aerobic heterotrophic bacteria : Selective or not ?

  Authors : Rontani Jean François, Harji Ranjita, Guasco Sophie, Prahl F.G., Volkman John K., Bhosle Narayan B., Bonin Patricia,
  Read the publication

2007

• Seasonal and diel distributions of denitrifying and bacterial communities in a hypersaline microbial mat (Camargue, France)

  Authors : Desnues Christelle, Michotey Valérie, Wieland Andrea, Zhizang Cui, Fourçans Aude, Duran Robert, Bonin Patricia,
  Read the publication

2006

• Nitrogen budget in a microbial mat of Camargue (South of France)

  Authors : Bonin Patricia, Michotey Valérie,
  Read the publication

• Experimental and field evidence for thiyl radical-induced stereomutation of alkenones and other lipids in sediments and seawater

  Authors : Rontani Jean François, Bonin Patricia, Prahl F.G., Jameson Ian D., Volkman John K.,
  Read the publication

2005

• Molecular, Biochemical, and Physiological Approaches for Understanding the Ecology of Denitrification

  Authors : Goréguès Christelle, Michotey Valerie, Bonin Patricia,
  Read the publication

• Molecular, Biochemical and Physiological Approaches for Understanding the Ecology of Denitrification

  Authors : Goregues Christèle, Michotey Valérie, Bonin Patricia,
  Read the publication

2004

• Isolation of hydrocarbonoclastic denitrifying bacteria from berre microbial mats

  Authors : Goréguès Christelle, Michotey Valerie, Bonin Patricia,
  Read the publication

• The anaerobic hydrocarbon biodegrading bacteria: An overview

  Authors : Bonin Patricia, Michotey V., Cravo-Laureau Cristiana, Hirschler-Réa A.,
  Read the publication

• Isolation of hydrocarbonoclastic denitrifying bacteria from berre microbial mats

  Authors : Goregues C, Michotey Valerie, Bonin Patricia,
  Read the publication

1997

• Hydrocarbon influence on denitrification in bioturbated Mediterranean coastal sediments

  Authors : Gilbert Franck, Stora Georges, Bonin Patricia, Ledréau Yveline, Mille Gilbert, Bertrand Jean-Claude,
  Read the publication

• Aerobic and anaerobic metabolism of 6,10,14-trimethylpentadecan-2-one by a denitrifying bacterium isolated from marine sediments

  Authors : Rontani Jean-Francois, Gilewicz Mj, Michotey Valerie, Zheng Tl, Bonin Patricia, Bertrand Jean Claude,
  Read the publication

• Evidence for anaerobic bacterial processes in the water column: denitrification and dissimilatory nitrate ammonification in the northwestern Mediterranean Sea

  Authors : Michotey Valerie, Bonin Patricia,
  Read the publication

1992

• Marinobacter hydrocarbonoclasticus gen. nov., sp. nov., a new, extremely halotolerant, hydrocarbon-degrading marine bacterium.

  Authors : Gauthier Michel J., Lafay Bénédicte, Christen Richard, Fernandez Luis, Acquaviva M., Bonin Patricia, Bertrand Jean-Claude,
  Read the publication