Patricia Bonin

2020

• Electrotrophy as potential primary metabolism for colonization of conductive surfaces in deep-sea hydrothermal chimneys

  Authors : Pillot Guillaume, Davidson Sylvain, Shintu Laetitia, Amin Oulfat, Godfroy Anne, Combet-Blanc Yannick, Bonin Patricia, Liebgott Pierre-Pol,
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• Meta-omics Provides Insights into the Impact of Hydrocarbon Contamination on Microbial Mat Functioning

  Authors : Aubé Johanne, Senin Pavel, Bonin Patricia, Pringault Olivier, Jeziorski Céline, Bouchez Olivier, Klopp Christophe, Guyoneaud Remy, Goñi-Urriza Marisol,
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• Meta-omics Provides Insights into the Impact of Hydrocarbon Contamination on Microbial Mat Functioning

  Authors : Aubé Johanne, Senin Pavel, Bonin Patricia, Pringault Olivier, Jeziorski Céline, Bouchez Olivier, Klopp Christophe, Guyoneaud Rémy, Goñi-Urriza Marisol,
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• Oxygen and light determine the pathways of nitrate reduction in a highly saline lake

  Authors : Valiente Nicolás, Jirsa Franz, Hein Thomas, Wanek Wolfgang, Bonin Patricia, José Gómez-Alday Juan,
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• Stress factors resulting from the Arctic vernal sea-ice melt: Impact on the viability of bacterial communities associated with sympagic algae

  Authors : Amiraux Rémi, Burot Christopher, Bonin Patricia, Massé Guillaume, Guasco Sophie, Babin Marcel, Vaultier Frederic, Rontani Jean-Francois,
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2019

• Pressure-Retaining Sampler and High-Pressure Systems to Study Deep-Sea Microbes Under in situ Conditions

  Authors : Garel Marc, Bonin Patricia, Martini Severine, Guasco Sophie, Roumagnac Marie, Bhairy Nagib, Armougom Fabrice, Tamburini Christian,
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• Enhancement of biotic degradation of terrestrial particulate organic matter in an estuarine salinity gradient: Interactive effects of organic matter pools and changes of bacterial communities.

  Authors : Bonin Patricia, Prime Anne-Hélène, Galeron Mairie-Aimée, Guasco Sophie, Rontani Jean-Francois,
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2018

• The nature of electron acceptor (MnIV/NO3) triggers differential expression of genes associated with stress and ammonium limitation responses in Shewanella algae C6G3

  Authors : Aigle Axel, Bonin Patricia, -Nunez Nicolas Fernandez, Loriod Béatrice, Guasco Sophie, Bergon Aurélie, Armougom Fabrice, Iobbi-Nivol Chantal, Imbert Jean, Michotey Valerie,
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• Salinity shifts in marine sediment: Importance of number of fluctuation rather than their intensities on bacterial denitrifying community

  Authors : Zaghmouri Imen, Michotey Valérie, Armougom Fabrice, Guasco Sophie, Bonin Patricia,
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2017

• Monitoring photo-oxidative and salinity-induced bacterial stress in the Canadian Arctic using specific lipid tracers

  Authors : Amiraux Remi, Belt Simon, Vaultier Frederic, Galindo Virginie, Gosselin Michel, Bonin Patricia, Rontani Jean-Francois,
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• Assessment of oil weathering and impact in mangrove ecosystem: PRISME Experiment.

  Authors : Jézéquel Ronan, Duboscq Karine, Sylvi Léa, Michaud Emma, Ferriz Lise Millera, Roic Enora, Duran Robert, Cravo-Laureau Cristiana, Michotey Valerie, Bonin Patricia, Gilbert Franck, Tedetti Marc, Militon Cécile, Cuny Philippe,
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• Physiological and transcriptional approaches reveal connection between nitrogen and manganese cycles in Shewanella algae C6G3

  Authors : Aigle Axel, Bonin Patricia, Iobbi-Nivol Chantal, Méjean Vincent, Michotey Valérie,
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2016

• Denitrification activity in mangrove sediments varies with associated vegetation

  Authors : Fernandes Sheryl Oliveira, Dutta Pinky, Gonsalves Maria-Judith, Bonin Patricia C., Lokabharathi P. A.,
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• Bacteria as part of bioluminescence emission at the deep ANTARES station (North-Western Mediterranean Sea) during a one-year survey

  Authors : Martini Severine, Michotey Valerie, Casalot Laurie, Bonin Patricia, Guasco Sophie, Garel Marc, Tamburini Christian,
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• The impact of long-term hydrocarbon exposure on the structure, activity, and biogeochemical functioning of microbial mats

  Authors : Aubé Johanne, Senin Pavel, Pringault Olivier, Bonin Patricia, Deflandre Bruno, Bouchez Olivier, Bru Noëlle, Biritxinaga-Etchart Edurne, Klopp Christophe, Guyoneaud Rémy, Goñi-Urriza Marisol,
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• Metatranscriptomes of oil-contaminated marine coastal sediment affected by oil addition and/or by the bioturbating activity of the marine polychaete Hediste diversicolor: Who are the microbial players?

  Authors : Militon Cécile, Atkinson Alexandre, Michotey Valerie, Jeziorski Celine, Cravo-Laureau Cristiana, Duran Robert, Bonin Patricia, Cuny Philippe,
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• Coupling of bacterial nitrification with denitrification and anammox supports N removal in intertidal sediments (Arcachon Bay, France)

  Authors : Fernandes Sheryl, Javanaud Cedric, Michotey Valerie, Guasco Sophie, Anschutz Pierre, Bonin Patricia,
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• Fate and Impact of Oil in Mangrove Ecosystem PRISME Experiment

  Authors : Jézéquel Ronan, Duboscq Karine, Sylvi Lea, Michaud Emma, Ferriz Lise Millera, Duran Robert, Cravo-Laureau Cristiana, Michotey Valerie, Bonin Patricia, Franck Gilbert, Tedetti Marc, Militon Cécile, Cuny Philippe,
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2015

• Microbial ecology of hydrocarbon-polluted coastal sediments.

  Authors : Duran Robert, Cuny Philippe, Bonin Patricia, Cravo-Laureau Cristiana,
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• Dynamic of bacterial communities attached to lightened phytodetritus

  Authors : Petit Morgan, Bonin Patricia, Amiraux Remi, Michotey Valerie, Guasco Sophie, Armitano Joshua, Jourlin-Castelli Cécile, Vaultier Frederic, Méjean Vincent, Rontani Jean-Francois,
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• Environmental microbiology as a mosaic of explored ecosystems and issues

  Authors : Faure Denis, Bonin Patricia, Duran Robert, Amato Pierre, Arsene-Ploetze Florence, Auguet Jean-Christophe, Legrand Bernard, Bertin Philippe N., Bettarel Yvan, Bigot-Clivot Aurélie, Blot Nicolas, Blouin Manuel, Bormans Myriam, Bouvy Marc, Bruneel O, Cébron Aurélie, Christaki Urania, Couée Ivan, Cravo-Laureau Cristiana, Danger Michael, de Lorgeril Julien, Desdevises Yves, Dessaux Yves, Destoumieux-Garzón D, Duprat Élodie, Erauso Gaël, Haichar Feth El Zahar, Fouilland Éric, Francez Andre-Jean, Fromin Nathalie, Geffard Alain, Ghiglione Jean-François, Huguet Arnaud, Grossi Vincent, Guizien Katell, Jardillier Ludwig, Jouquet Pascal, Joux Fabien, Kaisermann Aurore, Kaltz Oliver, Lata Jean-Christophe, Lecerf Antoine, Leyval Corinne, Luis Patricia, Masseret Estelle, Niboyet Audrey, Normand Philippe, Plewniak Frédéric, Poly Franck, Prado Soizic, Quaiser Achim, Ratet Pascal, Richaume Agnès, Rolland Jean-Luc, Rols Jean-Luc, Rontani Jf, Rossi Francesca, Sablé Sophie, Sivadon P, Soudant Philippe, Tamburini Christian, Tribollet Aline, Valiente Moro Claire, van Wambeke France, Vandenkoornhuyse Philippe, Vuilleumier Stéphane, Vandenkoornhuyse Philippe,
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• Molecular and biochemical characterization of mannitol-1-phosphate dehydrogenase from the model brown alga Ectocarpus sp.

  Authors : Bonin Patricia, Groisillier Agnès, Raimbault Alice, Guibert Anaïs, Boyen Catherine, Tonon Thierry,
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• Environmental microbiology reveals the Earth secret life.

  Authors : Faure Denis, Bonin Patricia, Duran Robert,
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• Draft-genome sequence of Shewanella algae strain C6G3

  Authors : Aigle Axel, Michotey Valerie, Bonin Patricia,
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• Ecological significance of Synergistetes in the biological treatment of tuna cooking wastewater by an anaerobic sequencing batch reactor.

  Authors : Militon Cécile, Hamdi Olfa, Michotey Valerie, Fardeau Marie-Laure, Ollivier Bernard, Bouallagui Hassib, Hamdi Moktar, Bonin Patricia,
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• Biogeochemical Cycles

  Authors : Bertrand Jean-Claude, Bonin Patricia, Caumette Pierre, Gattuso Jean-Pierre, Grégori Gérald, Guyoneaud Rémy, Le Roux Xavier, Matheron Robert, Poly Franck,
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• Use of dispersant in mudflat oil-contaminated sediment: behavior and effects of dispersed oil on micro- and macrobenthos.

  Authors : Cuny Philippe, Gilbert Franck, Militon Cécile, Stora Georges, Bonin Patricia, Michotey Valerie, Guasco Sophie, Duboscq Karine, Cagnon Christine, Jézéquel Ronan, Cravo-Laureau Cristiana, Duran Robert,
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• Effect of physical sediments reworking on hydrocarbon degradation and bacterial community structure in marine coastal sediments.

  Authors : Duran Robert, Bonin Patricia, Jezequel Ronan, Dubosc Karine, Gassie Claire, Terrisse Fanny, Abella Justine, Cagnon Christine, Militon Cécile, Michotey Valerie, Gilbert Franck, Cuny Philippe, Cravo-Laureau Cristiana,
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• Anaerobic nitrification-denitrification mediated by Mn-oxides in meso-tidal sediments: Implications for N-2 and N2O production

  Authors : Fernandes Sheryl, Javanaud Cedric, Aigle Axel, Michotey Valerie, Guasco Sophie, Deborde Jonathan, Deflandre Bruno, Anschutz Pierre, Bonin Patricia,
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• Aminobacterium thunnarium sp. nov., a mesophilic, amino acid-degrading bacterium isolated from an anaerobic sludge digester, pertaining to the phylum Synergistetes.

  Authors : Hamdi Olfa, Ben Hania Wajdi, Postec Anne, Bouallagui Hassib, Hamdi Moktar, Bonin Patricia, Ollivier Bernard, Fardeau Marie-Laure,
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• Substrates specialization in lipid compounds and hydrocarbons of Marinobacter genus.

  Authors : Bonin Patricia, Vieira Christophe, Grimaud Régis, Militon Cécile, Cuny Philippe, Lima Oscar, Guasco Sophie, Brussaard Corina P D, Michotey Valerie,
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• Complete genome sequence of a new member of the Marseilleviridae recovered from the Brackish submarine spring in the Cassis Port-Miou Calanque, France

  Authors : Doutre Gabriel, Arfib Bruno, Rochette Pierre, Claverie Jean-Michel, Bonin Patricia, Abergel Chantal,
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2014

• Mannitol metabolism in brown algae involves a new phosphatase family.

  Authors : Groisillier Agnès, Shao Zhanru, Michel Gurvan, Goulitquer Sophie, Bonin Patricia, Krahulec Stefan, Nidetzky Bernd, Duan Delin, Boyen Catherine, Tonon Thierry,
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• Bacterial diversity in relatively pristine and anthropogenically-influenced mangrove ecosystems (Goa, India).

  Authors : Fernandes Sheryl, Kirchman David L, Michotey Valerie, Bonin Patricia, Lokabharathi P A,
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2013

• Denitrification activity is closely linked to the total ambient Fe concentration in mangrove sediments of Goa, India

  Authors : Fernandes S, Gonsalves M, Michotey Valerie, Bonin Patricia, Lokabharathi P,
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• Trends in salinity and inorganic nitrogen compounds in the Berre lagoon (1994-2011) bacterial activities and nitrogen budgets

  Authors : Zaghmouri Imen, Michotey Valerie, Guasco Sophie, Raimbault Patrick, Garcia Nicole, Bernard Guillaume, Bonin Patricia,
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• Anaerobic bacterial degradation of pristenes and phytenes in marine sediments does not lead to pristane and phytane during early diagenesis

  Authors : Rontani Jean-Francois, Bonin Patricia, Guasco Sophie, Vaultier Frederic, Volkman John K.,
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2012

• Spatio-temporal diversity of free-living and particle-attached prokaryotes in the tropical lagoon of Ahe atoll (Tuamotu Archipelago) and its surrounding oceanic waters

  Authors : Michotey Valerie, Guasco Sophie, Boeuf Dominique, Morezzi Nicola, Durieu Brice, Charpy Loïc, Bonin Patricia,
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• Systems biology approaches at cellular level in the model organism Ectocarpus siliculosus to better understand brown algal physiology

  Authors : Tonon Thierry, Bonin Patricia, Prigent Sylvain, Shao Z., Groisillier Agnès, Rousvoal Sylvie, Goulitquer Sophie, Bourdon Jérémie, Eveillard Damien, Boyen Catherine, Siegel Anne,
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• Denitrification prevails over anammox in tropical mangrove sediments (Goa, India)

  Authors : Fernandes Sheryl, Michotey Valerie, Guasco Sophie, Bonin Patricia, Bharathi P. A. Loka,
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• Desulfosoma profundi sp nov., a thermophilic sulfate-reducing bacterium isolated from a deep terrestrial geothermal spring in France

  Authors : Gregoire Patrick, Fardeau Marie Laure, Guasco Sophie, Lagiere Joel, Cambar Jean, Michotey Valerie, Bonin Patricia, Ollivier Bernard,
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• Mimicking floodplain reconnection and disconnection using ¹⁵N mesocosm incubations

  Authors : Welti N., Bondar-Kunze E., Mair M., Bonin Patricia, Wanek W., Pinay Gilles, Hein T.,
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• Genome sequence of the marine bacterium Marinobacter hydrocarbonoclasticus SP17, which forms biofilms on hydrophobic organic compounds

  Authors : Grimaud R., Ghiglione J.-F., Cagnon Christine, Lauga B., Vaysse P.-J., Rodriguez-Blanco A., Mangenot S., Cruveiller S., Barbe V., Duran R., Wu L.-F., Talla E., Bonin Patricia, Michotey V.,
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• Nitrogen-limited mangrove ecosystems conserve N through dissimilatory nitrate reduction to ammonium

  Authors : Fernandes Sheryl, Bonin Patricia, Michotey Valerie, Garcia Nicole, Lokabharathi P. A.,
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2011

• Isolation and characterization of Thermanaerothrix daxensis gen. nov., sp. nov., a thermophilic anaerobic bacterium pertaining to the phylum "Chloroflexi", isolated from a deep hot aquifer in the Aquitaine Basin.

  Authors : Gregoire Patrick, Fardeau Marie Laure, Joseph Manon, Guasco Sophie, Hamaide F, Biasutti S, Michotey Valerie, Bonin Patricia, Ollivier Bernard,
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• Quantification des activités du cycle de l'azote dans des sédiments soumis à des apports d'eau douce: impact sur l'état d'eutrophisation de l'écosystème

  Authors : Zaghmouri Imen, Bonin Patricia, Michotey Valerie,
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• Caldilinea tarbellica sp nov., a filamentous, thermophilic, anaerobic bacterium isolated from a deep hot aquifer in the Aquitaine Basin

  Authors : Gregoire Patrick, Bohli Malek, Cayol Jean Luc, Joseph Manon, Guasco Sophie, Dubourg Karine, Cambar Jean, Michotey Valerie, Bonin Patricia, Fardeau Marie Laure, Ollivier Bernard,
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• Isolation and characterization of Thermanaerothrix daxensis gen. nov., sp nov., a thermophilic anaerobic bacterium pertaining to the phylum "Chloroflexi", isolated from a deep hot aquifer in the Aquitaine Basin

  Authors : Gregoire Patrick, Fardeau Marie Laure, Joseph Manon, Guasco Sophie, Hamaide Francette, Biasutti Sandra, Michotey Valerie, Bonin Patricia, Ollivier Bernard,
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• Anaerobic ammonium oxidation mediated by Mn-oxides: from sediment to strain level

  Authors : Javanaud Cedric, Michotey Valerie, Guasco Sophie, Garcia Nicole, Anschutz Pierre, Canton Mathieu, Bonin Patricia,
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• Les cycles géochimiques. Chapitre 14

  Authors : Bertrand Jean-Claude, Bonin Patricia, Caumette Pierre, Gattuso Jean-Pierre, Grégori Gérald, Guyoneaud Remy, Le Roux Xavier, Matheron Robert, Poly Franck,
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2010

• Denitrification : An important Pathway for Nitrous Oxide Production in Tropical Mangrove Sediments (Goa, India)

  Authors : Oliveira Fernandes Sheryl, Loka Bharathi P.A., Bonin Patricia, Michotey Valérie,
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• Potential alteration of UK37 paleothermometer due to selective degradation of alkenones by marine bacteria isolated from the haptophyte Emiliania huxleyi

  Authors : Zabeti Nathalie, Bonin Patricia, Volkmann John Kingston, Jameson Ian D., Guasco Sophie, Rontani Jean François,
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• Fatty acid composition of bacterial strains associated with living cells of the haptophyte Emiliania huxleyi

  Authors : Zabeti Nathalie, Bonin Patricia, Volkman John K., Guasco Sophie, Rontani Jean François,
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• Caldinitratiruptor microaerophilus, gen.nov., sp. nov. isolated from a French hot spring (Chaudes-Aigues, Massif Central) : a novel cultivated facultative microaerophilic anaerobic thermophile pertaining to the Symbiobacterium branch within the Firmicutes

  Authors : Fardeau Marie-Laure, Barsotti Vanessa, Cayol Jean-Luc, Guasco Sophie, Michotey Valérie, Joseph Manon, Bonin Patricia, Ollivier Bernard,
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2009

• Formation of pristane from a-tocopherol under simulated anoxic sedimentary conditions : A combination of biotic and abiotic degradative processes

  Authors : Rontani Jean François, Nassiry Mina, Michotey Valérie, Guasco Sophie, Bonin Patricia,
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• Seasonal variation in di-nitrogen fluxes and associated processes (denitrification, anammox and nitrogen fixation) in sediment subject to shellfish farming influences

  Authors : Minjeaud Laura, Michotey Valérie, Garcia Nicole, Bonin Patricia,
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2008

• Nitrogen fluxes from marine sediments : quantification of the associated co-occurring bacterial processes

  Authors : Minjeaud Laura, Bonin Patricia, Michotey Valérie,
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• Aerobic metabolism of vitamin E by marine bacteria : interaction with free radical oxidation (autoxidation) processes

  Authors : Rontani Jean François, Nassiry Mina, Guasco Sophie, Mouzdahir Abdelkrim, Bonin Patricia,
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• Degradation of alkenones by aerobic heterotrophic bacteria : Selective or not ?

  Authors : Rontani Jean François, Harji Ranjita, Guasco Sophie, Prahl F.G., Volkman John K., Bhosle Narayan B., Bonin Patricia,
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2007

• Seasonal and diel distributions of denitrifying and bacterial communities in a hypersaline microbial mat (Camargue, France)

  Authors : Desnues Christelle, Michotey Valérie, Wieland Andrea, Zhizang Cui, Fourçans Aude, Duran Robert, Bonin Patricia,
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2006

• Experimental and field evidence for thiyl radical-induced stereomutation of alkenones and other lipids in sediments and seawater

  Authors : Rontani Jean François, Bonin Patricia, Prahl F.G., Jameson Ian D., Volkman John K.,
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• Nitrogen budget in a microbial mat of Camargue (South of France)

  Authors : Bonin Patricia, Michotey Valérie,
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2005

• Molecular, Biochemical, and Physiological Approaches for Understanding the Ecology of Denitrification

  Authors : Goréguès Christelle, Michotey Valerie, Bonin Patricia,
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• Molecular, Biochemical and Physiological Approaches for Understanding the Ecology of Denitrification

  Authors : Goregues Christèle, Michotey Valérie, Bonin Patricia,
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2004

• Isolation of hydrocarbonoclastic denitrifying bacteria from berre microbial mats

  Authors : Goréguès Christelle, Michotey Valerie, Bonin Patricia,
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• Isolation of hydrocarbonoclastic denitrifying bacteria from berre microbial mats

  Authors : Goregues C, Michotey Valerie, Bonin Patricia,
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• The anaerobic hydrocarbon biodegrading bacteria: An overview

  Authors : Bonin Patricia, Michotey V., Cravo-Laureau Cristiana, Hirschler-Réa Agnès,
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1997

• Hydrocarbon influence on denitrification in bioturbated Mediterranean coastal sediments

  Authors : Gilbert Franck, Stora Georges, Bonin Patricia, Ledréau Yveline, Mille Gilbert, Bertrand Jean-Claude,
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• Aerobic and anaerobic metabolism of 6,10,14-trimethylpentadecan-2-one by a denitrifying bacterium isolated from marine sediments

  Authors : Rontani Jean-Francois, Gilewicz Mj, Michotey Valerie, Zheng Tl, Bonin Patricia, Bertrand Jean Claude,
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• Evidence for anaerobic bacterial processes in the water column: denitrification and dissimilatory nitrate ammonification in the northwestern Mediterranean Sea

  Authors : Michotey Valerie, Bonin Patricia,
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1992

• Marinobacter hydrocarbonoclasticus gen. nov., sp. nov., a new, extremely halotolerant, hydrocarbon-degrading marine bacterium.

  Authors : Gauthier Michel J., Lafay Bénédicte, Christen Richard, Fernandez Luis, Acquaviva M., Bonin Patricia, Bertrand Jean-Claude,
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